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For Users (v2022.XX):

  • WESTPA Command Line Interface
  • WESTPA Core
  • WESTPA Work Manager
  • WESTPA Tools
  • WESTPA Other Components
  • WESTPA Extensions
  • WESTPA Analysis
  • HDF5 file structure

For Developers:

  • Code and documentation style guide
  • How to create a WESTPA Plugin
  • Building the documentation
  • API

For Legacy Users (v2020.XX):

  • WEST
  • WEST tools
  • WEST work manager
  • WEST extensions
  • Command line tool index
    • w_init
    • w_bins
    • w_run
    • w_truncate
    • w_fork
    • w_assign
    • w_trace
    • w_fluxanl
    • w_ipa
    • w_pdist
    • w_succ
    • w_crawl
    • w_direct
    • w_select
    • w_states
    • w_eddist
    • w_ntop
    • plothist
    • ploterr
    • w_kinavg
    • w_kinetics
    • w_stateprobs
  • HDF5 file schema
  • Checklist
  • FAQs
WESTPA
  • Command Line Tool Index
  • View page source

Command Line Tool Index

Setting up and running a simulation:

  • w_init
  • w_bins
  • w_run
  • w_truncate
  • w_fork

Analyzing a simulation:

  • w_assign
  • w_trace
  • w_fluxanl
  • w_ipa
  • w_pdist
  • w_succ
  • w_crawl
  • w_direct
  • w_select
  • w_states
  • w_eddist
  • w_ntop

Plotting tools:

  • plothist
  • ploterr

Deprecated tools:

  • w_kinavg
  • w_kinetics
  • w_stateprobs
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© Copyright 2013, Matthew C. Zwier and Lillian T. Chong.

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